Sweet! I've always wanted something like this. The old EQAtlas is nice, and I have it in my bookmark toolbar, but theres just too much clicking involved. An all-in-one unit like this would be great.
My primary comment is about the Lightbox style popups of the maps. On normal HTML based Lightbox, you can click anywhere in the outer region to close it. On yours, it seems like there is only a ~100px radius around the content that allows you to close it. On larger maps, the range is even smaller and I find myself hunting around for a clickable region close the map. That is, on Chrome v9.0. [EDIT: I now see that the logo at the top always closes the map, but that was not obvious to me at first. Perhaps a labeled close button would be good]
The only other suggestion I have is to include "connecting zone" links to each map popup. That is one feature of EQAtlas I always use a lot, and it will reduce the number of clicks required even further.
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